PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.TQU2T
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 317aa    MW: 35415.2 Da    PI: 10.2417
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.TQU2TgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.59.9e-13265310655
                  HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +++Er RR ri +++ +L+el+P+     +k  s a++L +Av YIk+Lq
  Aradu.TQU2T 265 SIAERVRRTRISERMKKLQELVPNM----DKQASTADMLDMAVGYIKDLQ 310
                  689*********************7....688*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.913259309IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.27E-14262314IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.06E-11263312No hitNo description
Gene3DG3DSA:4.10.280.102.5E-13264312IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.5E-11265315IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.7E-10265310IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MDSSSRYHQQ QLNSSSSSAS GLLRFRSAPP SVLEQLQVVE GSCSSEQERS SSSSFLRFFS  60
SNKNKPSSTT KPPSLSLMNS NHRFTRLHNS STAPSASTSS GTDLPRQSTF PASHFSFHDN  120
NGYDTNANTM TKGVGNYSGS DELSLSTMNR FNNQISFSSS RSPSSSATAT NSNRNGGLFF  180
PNYGSWNETS YKRDDRNRIH KLIFDANQNE EFGNNKVVDT LSHQLSFPKA EPEMFAMENM  240
IHFPLSDSVP CKIRAKRGCA THPRSIAERV RRTRISERMK KLQELVPNMD KQASTADMLD  300
MAVGYIKDLQ KQFKVRN
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.TQU2T
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015969471.10.0transcription factor bHLH130-like isoform X1
RefseqXP_025604460.10.0transcription factor bHLH130
TrEMBLA0A445CLE70.0A0A445CLE7_ARAHY; Uncharacterized protein
STRINGGLYMA03G29750.69e-70(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2390622
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.11e-45bHLH family protein