PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.TGP1V
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 88aa    MW: 9753.85 Da    PI: 4.1966
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.TGP1VgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.66.9e-0657831344
                 HHHHHHHHHHHHCTSCCC...TTS-STCHHHH CS
          HLH 13 RdriNsafeeLrellPkaskapskKlsKaeiL 44
                 +++iN++++ Lr+ +P+      +K++Ka+i 
  Aradu.TGP1V 57 MKQINERLFALRTAVPNV-----TKMDKASII 83
                 89***************8.....79***9997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.9094488IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.31E-64585IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.0E-55185IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.93E-55784No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    Send to blast
MEENSLTETC WFNILANDLL RWQLDGAFSG DYYDSTSPDG GASSAVSMDI VSDQNSMKQI  60
NERLFALRTA VPNVTKMDKA SIIKDGTR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.TGP1V
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015949540.15e-51transcription factor bHLH35 isoform X2
RefseqXP_029147804.15e-51transcription factor bHLH35 isoform X2
SwissprotQ2HIV92e-21BH035_ARATH; Transcription factor bHLH35
TrEMBLA0A445EEM24e-49A0A445EEM2_ARAHY; Uncharacterized protein
STRINGLus100069513e-24(Linum usitatissimum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3021222
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.35e-24bHLH family protein