PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.T7DND
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 350aa    MW: 37760.3 Da    PI: 6.2482
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.T7DNDgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY86.42.6e-27176237159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  ++Dg++WrKYGqKe+ gs++ rsYYrCt++   gCp+kk+v++ +++p+++e+tY g+H+++
  Aradu.T7DND 176 MEDGFTWRKYGQKEILGSKYQRSYYRCTHQkqyGCPAKKQVQKIDNNPNIFEVTYVGDHTCH 237
                  58***************************99999**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081120.644171239IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.3E-27171238IPR003657WRKY domain
SuperFamilySSF1182901.44E-25173238IPR003657WRKY domain
SMARTSM007741.3E-36176238IPR003657WRKY domain
PfamPF031061.3E-25177237IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MEEVLNSISH GCELAKKIES EQLANMANIQ PDILVSSIDE VVKAFNGAKE KLLMTMVNNN  60
SSSSSSSFAQ QQMGACGASS FSIMMQEWMM KSSSSTSYAA QTTMDQVLLQ MQGFPAGGGD  120
LQQLRNVEGS SSMDKSMKGL EVHQLSPSRP RKRKNDAEKR VVNLPAQQLG NTEMPMEDGF  180
TWRKYGQKEI LGSKYQRSYY RCTHQKQYGC PAKKQVQKID NNPNIFEVTY VGDHTCHMSS  240
TAPSSFPQQL QLDNINIMPP NNPLQGAGGP NTSSPSSSMW MHSVSLSLGG GGDGSSSAGA  300
GPSTLKYGVG GADYLVADMA DVMFNSGSSS GNCSMESLFP TSDDPSEKKT
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00304DAPTransfer from AT2G40740Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015932976.10.0PREDICTED: WRKY transcription factor 55
TrEMBLK7KLN87e-84K7KLN8_SOYBN; Uncharacterized protein
STRINGGLYMA04G40121.12e-83(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF86293142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.15e-47WRKY DNA-binding protein 55