PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.R5YE9
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Nin-like
Protein Properties Length: 286aa    MW: 33081.6 Da    PI: 7.759
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.R5YE9genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK83.42.2e-2684134252
       RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                  +k +s +++s+yF++pi++AAkeL+v+lT+LK++CR++GI+RWPhRk+ sl
  Aradu.R5YE9  84 TKMLSRKMISEYFYMPITQAAKELDVGLTLLKKRCRELGIRRWPHRKLMSL 134
                  7889********************************************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.58770154IPR003035RWP-RK domain
PfamPF020427.7E-2187134IPR003035RWP-RK domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0051302Biological Processregulation of cell division
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MECYPSLPFY ETLSIEPIST IKDYDFYDIK KGFSVWNEVD AGFDCSEKVS SSSLLSNKNN  60
EEDKSIRRVM NKRVCREERS SNSTKMLSRK MISEYFYMPI TQAAKELDVG LTLLKKRCRE  120
LGIRRWPHRK LMSLQTLINN VQELGKEEGR ESEEKLRNAI EILEKEKKLL EEMPDLQLED  180
NTKRLRQACF KANYKKRKLM MGCTSSNSSM ESSSSSSYHI IGHNALRTSQ NNTMGGVEFI  240
SFDDDEYQER DIKSVLSLPS LSHNIQMCSS YMFNHPSDAS FSSAIR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.R5YE9
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015945620.20.0protein RKD3-like
TrEMBLA0A445EJE61e-172A0A445EJE6_ARAHY; Uncharacterized protein
STRINGGLYMA05G01030.22e-94(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF61843052
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.17e-43RWP-RK domain-containing protein