PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.Q51PJ
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 465aa    MW: 49804.5 Da    PI: 7.4629
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.Q51PJgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.67.9e-31218276259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +Dg++WrKYGqK+ kg++ pr+YYrCt+a gCpv+k+v+r+aed +v+++tYeg+Hnh+
  Aradu.Q51PJ 218 SDGCQWRKYGQKMAKGNPSPRAYYRCTMAaGCPVRKQVQRCAEDSTVLITTYEGNHNHP 276
                  7***************************99****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.6E-33202278IPR003657WRKY domain
SuperFamilySSF1182901.28E-27210278IPR003657WRKY domain
PROSITE profilePS5081130.71212278IPR003657WRKY domain
SMARTSM007745.0E-37217277IPR003657WRKY domain
PfamPF031066.9E-27219276IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 465 aa     Download sequence    Send to blast
MQTGLNLTCE TTGISTSKGS PNADNTESER KMVEGELRRL QEENRKLRSM VDQIAKSYSQ  60
LQAQLFMALQ KQKLTHHHQN TGVKSNGMIS GEKAVEGDGR AKVEMKNNDA SVSGDEKRER  120
EVSASNNNGN NAEEVMSKKH DENDDDNEGD EDGLTKLHLG KQVAASATEE DVLERSSSQS  180
WGSCKTPNLE EPKLPSSDLP FRKARVSVRA RSEAPLISDG CQWRKYGQKM AKGNPSPRAY  240
YRCTMAAGCP VRKQVQRCAE DSTVLITTYE GNHNHPLPPA ATAMANTTSA AAAMLLSGST  300
SSSSKETLAT SAAGGYFSSS MPYTSMATLS ASAPFPTITL DLTHNHHNAL QLHRVVPPPG  360
VTFPLPLHAV TPPHQLIAGH PFLISHHQKL MPPLVHRQQP QASNNSPSMV ETVSAAIALD  420
PNFTAAVAAA LSSIIGSSNN GGSAISVSPN GSPQLPQSCT TYSTN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-23208278877Probable WRKY transcription factor 4
2lex_A2e-23208278877Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015968810.10.0PREDICTED: probable WRKY transcription factor 47 isoform X3
RefseqXP_015968808.10.0PREDICTED: probable WRKY transcription factor 47 isoform X1
TrEMBLI1NBI81e-167I1NBI8_SOYBN; Uncharacterized protein
STRINGGLYMA19G40950.21e-167(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF104392541
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01720.19e-65WRKY family protein