PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.PW6QG
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 364aa    MW: 40725.1 Da    PI: 8.6164
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.PW6QGgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.46.9e-29290348259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +D ++ rKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYegeHnh+
  Aradu.PW6QG 290 SDDFSGRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERAVDDPNMLVVTYEGEHNHT 348
                  699************************988****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105332.5E-13245287IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.802.0E-30277348IPR003657WRKY domain
PROSITE profilePS5081129.207284350IPR003657WRKY domain
SuperFamilySSF1182903.66E-24285349IPR003657WRKY domain
SMARTSM007741.4E-34289349IPR003657WRKY domain
PfamPF031067.3E-24291347IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    Send to blast
MAVEFITGYD RGGDGDHSFV GNNDATTAAT VGEAACGGIQ RVEKLMDMIS EQKHEENDDY  60
SSLEKEEFAG VVVSILDNNK PRTRLLGHAR FRRAPSTTTL LPNNLQLQQM DHEKETINAT  120
RFFELSKEKD GFSPQQRSKE EQVSSSAFKL YCPTSILPPL PQRKSNNYHD YPSRFSHNQK  180
NNNVEANNGS STSIDFSTTN SYTYLSTLTN NIDDDHSLQI QRVSLNKGSS SYMQKPPLSN  240
SSLNKRKCNS LDNNVQSSSS KCHCYKKRKS KLKRVIRVAA ISSKTADIPS DDFSGRKYGQ  300
KPIKGSPHPR GYYKCSSVRG CPARKHVERA VDDPNMLVVT YEGEHNHTLT HDDYANDAVI  360
LQSS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-19277349273WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015972394.10.0PREDICTED: probable WRKY transcription factor 7
TrEMBLA0A0B2QM441e-83A0A0B2QM44_GLYSO; Putative WRKY transcription factor 7
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3000022
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.15e-66WRKY DNA-binding protein 7