PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.M1GCR
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 334aa    MW: 37907.3 Da    PI: 6.6968
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.M1GCRgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.95.5e-30120180259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  +Dgy+WrKYGqK++ gs++prsYYrCt++   +C+++k+v+rs++dp+++eitY+g+H+++
  Aradu.M1GCR 120 EDGYSWRKYGQKDILGSKYPRSYYRCTFRntkDCWATKQVQRSEDDPNIFEITYKGSHTCS 180
                  8**************************998889**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.3E-28116180IPR003657WRKY domain
SuperFamilySSF1182901.44E-25118180IPR003657WRKY domain
SMARTSM007742.5E-40119181IPR003657WRKY domain
PROSITE profilePS5081122.056120177IPR003657WRKY domain
PfamPF031064.3E-27120179IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MECEGSWEKS ELKNELVQGM EVARKLKAEL ELESSADNRD LLVDKILSSY DKALLILRWN  60
GSVSKPHTLH PSTKTSPPQS PLPHNHQQEL KHSSQKRKMI SKWVNQVKVN SENGFEGSHE  120
DGYSWRKYGQ KDILGSKYPR SYYRCTFRNT KDCWATKQVQ RSEDDPNIFE ITYKGSHTCS  180
KGKKNAAMSA KSPDIQEPQE HHTNFQNMLT VTVAKPGNEE MACPFTSPST SSGCRTQENQ  240
NFLPSILENN PFLGSLSQTH LLLPNTPESN YFPSPFCANE LDGIYSNRCL EFDVSEIISA  300
HTSATNPPIF DFDFSLDPLE LGQNFHFNAS RFPH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A4e-131201771872Probable WRKY transcription factor 4
2lex_A4e-131201771872Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015964535.10.0PREDICTED: probable WRKY transcription factor 41
TrEMBLA0A151SV621e-129A0A151SV62_CAJCA; Putative WRKY transcription factor 41
STRINGGLYMA05G36970.11e-125(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49334157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.18e-61WRKY family protein