PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.KG41H
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 362aa    MW: 40663.4 Da    PI: 4.6313
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.KG41HgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.72.7e-29122183159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  ldDgy+WrKYGqK++ g++fpr+YYrCt++   gC ++k+v+rs+edp+++e+ Y+g+H+++
  Aradu.KG41H 122 LDDGYSWRKYGQKDILGAKFPRGYYRCTYRnvqGCLATKQVQRSDEDPTMIEVNYRGRHTCT 183
                  59***************************98989**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.5E-27111184IPR003657WRKY domain
PROSITE profilePS5081122.894117180IPR003657WRKY domain
SuperFamilySSF1182903.14E-25121184IPR003657WRKY domain
SMARTSM007743.2E-40122184IPR003657WRKY domain
PfamPF031061.9E-26123182IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009751Biological Processresponse to salicylic acid
GO:0010193Biological Processresponse to ozone
GO:0042542Biological Processresponse to hydrogen peroxide
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    Send to blast
MEYAENGEHG LINELIQGKE LAKQLCNLLS SSSSSSSKEI LIDKILSTYE KALTMLNSDS  60
TIPNLINSHS SSSSINGSPS RSDLIDNDEE FKDKPPLKKR KTMPKWTEKV KVCSKTGLEG  120
SLDDGYSWRK YGQKDILGAK FPRGYYRCTY RNVQGCLATK QVQRSDEDPT MIEVNYRGRH  180
TCTQSKHSNK AFPSKTMLPV LEKNQFHKFQ NNQPQKQEKM EQTQEEIFNF EAKLELDTNT  240
NITTKDDDIF PWFCYLSPSM GSENGDNDML LSDSMFLESF SPDIASFISP STSESDLFCL  300
SPCQFGSSNN NGIVQASESD ITEILSAPTS VTNSPIMDFD MLLDKLDFDT IFPSNTTEIS  360
SS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-131221801772Probable WRKY transcription factor 4
2lex_A1e-131221801772Probable WRKY transcription factor 4
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00525DAPTransfer from AT5G24110Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015968387.10.0PREDICTED: probable WRKY transcription factor 30
TrEMBLA0A151TXZ01e-142A0A151TXZ0_CAJCA; Putative WRKY transcription factor 30
STRINGGLYMA19G44380.11e-135(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49334157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24110.11e-46WRKY DNA-binding protein 30