PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.KEE43
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 320aa    MW: 35677.1 Da    PI: 8.2094
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.KEE43genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.67.3e-30165224159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  ++Dgy+WrKYGqK+ ++++ pr+Y++C++a +Cpvkkkv+rs ed++v++ tYegeHnh+
  Aradu.KEE43 165 VKDGYQWRKYGQKVTRDNPSPRAYFKCSFApSCPVKKKVQRSVEDQSVLVATYEGEHNHP 224
                  58***************************99****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.1E-29155226IPR003657WRKY domain
PROSITE profilePS5081127.152160226IPR003657WRKY domain
SuperFamilySSF1182902.22E-25162226IPR003657WRKY domain
SMARTSM007744.5E-34165225IPR003657WRKY domain
PfamPF031063.5E-24166224IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0002237Biological Processresponse to molecule of bacterial origin
GO:0009611Biological Processresponse to wounding
GO:0009751Biological Processresponse to salicylic acid
GO:0010200Biological Processresponse to chitin
GO:0042742Biological Processdefense response to bacterium
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0050691Biological Processregulation of defense response to virus by host
GO:0050832Biological Processdefense response to fungus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MDCSSWINTS LDLNINPHHH RVHHEEVPKK QVESNVFSLG LSMVPLKEES NTDYLEEELK  60
RVTAENKKLA EMLSVVCENY NTLRNHLMEY MKKNPEKELS PSSKKRKSES SNNNCDPMAL  120
ASNNGNSESS STDEESCKKP REETIKAKTS RVYVRTEASD TSLIVKDGYQ WRKYGQKVTR  180
DNPSPRAYFK CSFAPSCPVK KKVQRSVEDQ SVLVATYEGE HNHPLPSQME ATSGPNRCMT  240
IGSVPCSASI SSSAPTVTLD LTKSKPSNNN DSKITTKPKV DSPEQVPNVL VEQMASSLTK  300
DPNFRAALVA ALSGRLMHNN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-21150226174WRKY transcription factor 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00251DAPTransfer from AT1G80840Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015938143.10.0PREDICTED: probable WRKY transcription factor 40
SwissprotQ9SAH71e-103WRK40_ARATH; Probable WRKY transcription factor 40
TrEMBLC6TAR11e-169C6TAR1_SOYBN; Putative uncharacterized protein
STRINGGLYMA08G23380.11e-162(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF97334115
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.12e-94WRKY DNA-binding protein 40