PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.KD2FK
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 265aa    MW: 30088.9 Da    PI: 8.3536
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.KD2FKgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY87.61.1e-2795153259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +Dgy+WrKYGqK+ k++  pr+Y+rC++a +Cp+kkkv+++ +d+++++ tY geHnh 
  Aradu.KD2FK  95 RDGYQWRKYGQKVTKDNVSPRAYFRCSMApSCPAKKKVQKCIHDKSILVATYDGEHNHA 153
                  7***************************99****************************6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.2E-2788154IPR003657WRKY domain
PROSITE profilePS5081123.57189155IPR003657WRKY domain
SuperFamilySSF1182903.79E-2490153IPR003657WRKY domain
SMARTSM007745.9E-3094154IPR003657WRKY domain
PfamPF031069.3E-2396152IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    Send to blast
MDEKVEALQV ELQRVKEENS ALRLMFEVLS NKFKSLQSQI QDINKESEQI IGFNNSMPIV  60
DSTNCKRPRL EFPTAKRPLQ IFVRTNPKDD TLMIRDGYQW RKYGQKVTKD NVSPRAYFRC  120
SMAPSCPAKK KVQKCIHDKS ILVATYDGEH NHAAIQDSSM PSSSTPKGSV ANKNNNNNSK  180
NNNDLPLPIL ENYKKWSHQT DSIRLCCDDV TMQKSNTKIE EYANSLIKDP EFTAALAEAV  240
ARTITGQSKE QDLNLNLGFQ QGDEN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-18931521371WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015972253.10.0PREDICTED: probable WRKY transcription factor 40
TrEMBLA0A151QX951e-106A0A151QX95_CAJCA; Putative WRKY transcription factor 40
STRINGGLYMA14G11920.13e-95(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF73983044
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.12e-41WRKY DNA-binding protein 40