PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.JBN5K
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family GeBP
Protein Properties Length: 199aa    MW: 22043.1 Da    PI: 10.1458
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.JBN5KgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57379.93.8e-2547143297
       DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkks..isfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                  lfqr++seeDei +L+Gl +f aktgk+p++  d+fy+f+k+s  i ++vs  q+ eKirrLKkKf++   k k+gk  +  k+h+ ++++l k +Wg
  Aradu.JBN5K  47 LFQRVFSEEDEIGILKGLSEFIAKTGKEPYKCADEFYDFMKGSnlIRANVSCMQVKEKIRRLKKKFENILIKEKNGKG-TTLKPHELEALQLGKNVWG 143
                  79**************************************9755599*************************888887.6789**************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045047.7E-2448143IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MLKSQPSASV SQTKSGSKRA AENGIDHSEQ PKRVKKAQED AQKSKSLFQR VFSEEDEIGI  60
LKGLSEFIAK TGKEPYKCAD EFYDFMKGSN LIRANVSCMQ VKEKIRRLKK KFENILIKEK  120
NGKGTTLKPH ELEALQLGKN VWGHDGRGGE AVLKETAKKD TVNNEKAAKK ALVPHSKGKA  180
EAKSKLNSEP LDSNEDSEG
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.JBN5K
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015931658.11e-139probable transcription factor At1g61730
RefseqXP_015931774.11e-139probable transcription factor At1g61730
TrEMBLA0A445C6H31e-121A0A445C6H3_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18313490
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.16e-23DNA-binding storekeeper protein-related transcriptional regulator