PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.I1JUP
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 272aa    MW: 30621.6 Da    PI: 6.1732
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.I1JUPgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY105.72.4e-33112169259
                  --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                  +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers+edp++v++tYeg+H h+
  Aradu.I1JUP 112 EDGYRWRKYGQKAVKNSPFPRSYYRCTNNNCSVKKRVERSSEDPTIVITTYEGQHCHH 169
                  8******************************************************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.9E-3496170IPR003657WRKY domain
SuperFamilySSF1182901.57E-28103169IPR003657WRKY domain
PROSITE profilePS5081129.62106171IPR003657WRKY domain
SMARTSM007746.6E-39111170IPR003657WRKY domain
PfamPF031062.9E-26112169IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MEPCQKPPPP PEQSDASCFF SAVTDSTNML ADFDWIGGEE GDTMCLPPEN NSNNNNQSPS  60
SSSAEDPPES SIASDGKQLD KEKPPSRNKK KQKRMKQPRF AFMTKSETDH LEDGYRWRKY  120
GQKAVKNSPF PRSYYRCTNN NCSVKKRVER SSEDPTIVIT TYEGQHCHHS VGTFHHHRQL  180
SGMLSSNQKS TFATQFSLGN MSHFYYPIDQ LPEENTLISS SVSDDPYCHS HNNDNYNGRC  240
SITLADSSTP EELPTDDGLL GDILLPRQMR NG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-2499168271WRKY transcription factor 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00067PBMTransfer from AT1G69310Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015957262.10.0PREDICTED: probable WRKY transcription factor 57
TrEMBLA0A151R2J22e-69A0A151R2J2_CAJCA; Putative WRKY transcription factor 57
TrEMBLG7JXY42e-69G7JXY4_MEDTR; Uncharacterized protein
STRINGGLYMA02G12830.15e-67(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF108143140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.22e-52WRKY DNA-binding protein 57