PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.I1GRS
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 306aa    MW: 33424.6 Da    PI: 10.4416
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.I1GRSgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.42.2e-31226283359
                  -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  D+y+WrKYGqK++kgs++prsYY+C+s  gCp++k+ver+++dp+++++tYeg+H+h+
  Aradu.I1GRS 226 DEYSWRKYGQKPIKGSPYPRSYYKCSSVrGCPARKHVERAQDDPNTLIVTYEGDHRHT 283
                  9*************************988****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105338.2E-15176222IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.801.3E-32213284IPR003657WRKY domain
PROSITE profilePS5081129.964219285IPR003657WRKY domain
SuperFamilySSF1182901.96E-26222284IPR003657WRKY domain
SMARTSM007741.9E-36224284IPR003657WRKY domain
PfamPF031061.4E-26226282IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MESQIAIQEA ASAGLKSMEH LIRLLSSQSP SSSSSSSHYR IDLNNRDCTE ITDFTVSKFK  60
QVINLLNRTG HARFRRAPSQ LDDDKFNHVQ SKVVVPPPPP PPPQGLTLDF AKPVQVNKPS  120
INNNKDTSCS TSLSPPMSTT TSSFMSTITG DGSVSDGKIG PSIIAAGKPP LSSSHRKRCH  180
DATLSSGKAT SSSSSQCHCS KRRKSRVKRV VRMAAISSRI ADIPGDEYSW RKYGQKPIKG  240
SPYPRSYYKC SSVRGCPARK HVERAQDDPN TLIVTYEGDH RHTQTQPQPV GFSPHHLSST  300
ALTRAT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-22212282271WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015973258.10.0PREDICTED: probable WRKY transcription factor 11 isoform X1
SwissprotQ9SV151e-96WRK11_ARATH; Probable WRKY transcription factor 11
TrEMBLI1LVK71e-125I1LVK7_SOYBN; Uncharacterized protein
STRINGGLYMA13G00380.11e-124(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13143498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.26e-71WRKY DNA-binding protein 11