PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.GI8Z2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 542aa    MW: 58384.5 Da    PI: 7.2872
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.GI8Z2genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.11.1e-30300358259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+
  Aradu.GI8Z2 300 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTILITTYEGTHNHP 358
                  7*********************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.0E-33284360IPR003657WRKY domain
SuperFamilySSF1182906.8E-28292360IPR003657WRKY domain
PROSITE profilePS5081129.562294360IPR003657WRKY domain
SMARTSM007741.8E-36299359IPR003657WRKY domain
PfamPF031061.2E-26301358IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0016036Biological Processcellular response to phosphate starvation
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0080169Biological Processcellular response to boron-containing substance deprivation
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 542 aa     Download sequence    Send to blast
MDTAGWALTL DSSSSFSSSK SSAIRHSNKS HVSTMFPTLG GFSATDPSMS SDHNNRAVVG  60
EVDFFNTSSS SSVKNQTCTH GSLSEFNLHV NTGLQLLTAN SKSDQSTVDD GVSSDTEDKR  120
PKTTQLVQVQ EELQRVNSEN QKLKETLNHM RSSYMNLQMQ VAALMQHQQK QQVSETTTEN  180
HEVGKVKGDD EKKEGRSSGG GGMIPRQLLD LVASGTAEVD DQVSNSSSEE RTRSSTPQNH  240
KNSNGKMENT GEDLESSQQG WDNPNKFQRL NPATDQSTAE ATMRKARVSV RARSEAPMIS  300
DGCQWRKYGQ KMAKGNPCPR AYYRCTMAVG CPVRKQVQRC AEDRTILITT YEGTHNHPLP  360
PAAMAMASTT AAAASMLLSG SMSSADGIMN SSMMARAILP SSSMATLSAS APFPTVTLDL  420
THQPNALPLQ YHQRQQQQHP HAQLPQVIAQ ALYNQSKFSG LQLSQDVGSS QASRLPSLHP  480
NQNNPLLADK VNAITNDPNF TAVVAAAISS IIGGAHQNNN ANNSDANPNI INSATVGSFS  540
GN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-22286362176WRKY transcription factor 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00209DAPTransfer from AT1G62300Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015940961.10.0PREDICTED: WRKY transcription factor 6 isoform X1
SwissprotQ9C5191e-137WRKY6_ARATH; WRKY transcription factor 6
TrEMBLI1KZU80.0I1KZU8_SOYBN; Uncharacterized protein
STRINGGLYMA09G00820.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF86634121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-104WRKY family protein