PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.EY4MD
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 516aa    MW: 56376.8 Da    PI: 6.5063
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.EY4MDgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.83e-30258316259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                   Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +v+++tYeg+Hnh+
  Aradu.EY4MD 258 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAsGCPVRKQVQRCAEDRTVLVTTYEGKHNHP 316
                  7***************************99****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.1E-33242318IPR003657WRKY domain
SuperFamilySSF1182901.57E-27250318IPR003657WRKY domain
PROSITE profilePS5081130.021252318IPR003657WRKY domain
SMARTSM007744.7E-36257317IPR003657WRKY domain
PfamPF031062.3E-26259316IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 516 aa     Download sequence    Send to blast
MGGDAGLSMD SSDPIRRFFL RSNSPVILNS FPEHKWNMNL NTDHETASFQ QVNLISSCSS  60
SHDHHHNTRQ ELDFFVTHND DNLIASSSFP AADHDDNHRH SLEFKVNTGL NLLTTSTTED  120
DHEVGVIEAE IERVKEENER IREMIDEANS HYSALQMHHM NLMNKSSDDE RVLVPRQFMD  180
LGLATNSHNC SSSRSKSPSG NSSGDGEKKR MKREESPTRE EEANKSSPAK HNLDQAHEAT  240
MRKARVSVRA RSEAPMITDG CQWRKYGQKM AKGNPCPRAY YRCTMASGCP VRKQVQRCAE  300
DRTVLVTTYE GKHNHPLPPA AMAMAQTTSS AATMLLSGSS MSTNDNTTLI NNATNFLATT  360
LLPSSSSSSS AATSTMATIS ASAPFPTITL DLTHDDSPNN NNINNNNPFQ FPIRPSTIPQ  420
IPFQIFGGNS SHNNSNNQSK FCGLQMPNNN NKDHSNSSSS SNNLVDTVGA AIASDPNFTA  480
ALVSALSSFI SAAAPTQQNN ISNSNDNGNG TLNNNS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-22244320176WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015953251.10.0PREDICTED: probable WRKY transcription factor 31 isoform X1
RefseqXP_015953252.10.0PREDICTED: probable WRKY transcription factor 31 isoform X2
SwissprotQ9C5191e-104WRKY6_ARATH; WRKY transcription factor 6
TrEMBLA0A151S0H31e-147A0A151S0H3_CAJCA; WRKY transcription factor 6
STRINGGLYMA12G10350.11e-139(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF86634121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.19e-72WRKY family protein