PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.DT9DS
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 467aa    MW: 50639 Da    PI: 6.9012
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.DT9DSgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.11.2e-30205263259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                   Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+
  Aradu.DT9DS 205 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTILVTTYEGNHNHP 263
                  7***************************99****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.4E-33189265IPR003657WRKY domain
SuperFamilySSF1182907.19E-28197265IPR003657WRKY domain
PROSITE profilePS5081129.7199265IPR003657WRKY domain
SMARTSM007741.2E-36204264IPR003657WRKY domain
PfamPF031061.6E-26206263IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    Send to blast
MTRDLSLMNT TSSPPPPHHH HHNTMNSDIL DSKVNTGLNL LTTNTSSDQS VVDDDISPNS  60
HQKRPVPDQT VVILAELERT KAENQRLRER LDRVTAEYKA LQMQVVALMQ QHKPEEEEEK  120
KQDAAPRQFM DLGLATNGAE TGEEASLSSS ERSKSPERKN GSSDDHEKNS REDSPLAPRN  180
VDQAEATMRK ARVSVRARSE APMMTDGCQW RKYGQKMAKG NPCPRAYYRC TMAAGCPVRK  240
QVQRCAEDRT ILVTTYEGNH NHPLPPAAMA MAQTTSSAAR MLLSGSMSSS DGLMNANFLT  300
RTLLPCSSSM ATISASAPFP TVTLDLTHSP NPLQFPNHQN HFQLPFPHSP PSSLLPHIFG  360
HALYNHSKFS GLQLSQDADP SSQPPPPPPQ LADSVSAATA AIAADPNFTA ALAAAITSII  420
GGAQHQNNNG NTNNSTVVNN GNNTSTPNNN TNGSNNNINS SNFSSEN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A4e-21195265877Probable WRKY transcription factor 4
2ayd_A4e-21191267176WRKY transcription factor 1
2lex_A4e-21195265877Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015936140.10.0PREDICTED: probable WRKY transcription factor 31
SwissprotQ9C5191e-131WRKY6_ARATH; WRKY transcription factor 6
TrEMBLA0A0B2RVN50.0A0A0B2RVN5_GLYSO; WRKY transcription factor 6
STRINGGLYMA13G38630.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF86634121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.12e-77WRKY family protein