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Plant Transcription
Factor Database
v4.0
Previous version: v1.0,
v2.0,
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.DRR9K | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | bHLH | ||||||||
Protein Properties | Length: 464aa MW: 51190.7 Da PI: 6.7008 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.3 | 2e-11 | 267 | 309 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+++L Aradu.DRR9K 267 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLREL 309 79*********************66......***************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 15.675 | 260 | 309 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 3.93E-16 | 263 | 322 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 8.2E-14 | 266 | 315 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 4.6E-9 | 266 | 309 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 4.96E-12 | 267 | 313 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 1.9E-15 | 267 | 322 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd04873 | 4.39E-5 | 393 | 453 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0010440 | Biological Process | stomatal lineage progression | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0050826 | Biological Process | response to freezing | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 464 aa Download sequence Send to blast |
MMSSSWASME AETEHQQQTH NDRDFTSLCS FNNNLPFMEV DDVNDIMMMM TMMRDMSNFF 60 PEPDTTNNNN LVLLHHHSSS SSSSSSSSSH LQCFLPPPPP PNPFDMPTMA SFLDPHQASI 120 TATTDFGGFH HHNLEELGSC SSSGKPAPPP PPPLFFNRSK ILRPLDDSLP PSGAQPTLFQ 180 KRAALRKNNS SSQQQQGGVL GEDDNNNNKN SMKRKVMMEM EDNGSFDGSS AFNYDSGDDL 240 IETNNKKNNQ KGGGGKNKKG MPAKNLMAER RRRKKLNDRL YMLRSVVPKI SKMDRASILG 300 DAIEYLRELL QRINELHNEL ESSSSTSTNS GSGSVMTAVP TVVASSSFYP LTPTPPSLPT 360 RIKEEICPTS LPSPNAQPPR VDVRLREGRA VNIHMFCGRK AGLLLSTMRA LDTLGLDIQQ 420 AVISCFNGFA LDIFRAEQCK EGQDVHPEQI KAVLLDTAGY PAII |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 268 | 275 | ERRRRKKL |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015937933.1 | 0.0 | PREDICTED: transcription factor SCREAM2-like | ||||
Swissprot | Q9LSE2 | 1e-114 | ICE1_ARATH; Transcription factor ICE1 | ||||
TrEMBL | B8XJY5 | 1e-144 | B8XJY5_SOYBN; BHLH transcription factor | ||||
STRING | GLYMA04G37750.2 | 1e-144 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2414 | 34 | 82 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G26744.4 | 1e-104 | bHLH family protein |