PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.DRR9K
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 464aa    MW: 51190.7 Da    PI: 6.7008
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.DRR9KgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.32e-11267309754
                  HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
          HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                  ++ErrRR+++N+++  Lr+++Pk +      K++ a+iL  A+eY+++L
  Aradu.DRR9K 267 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLREL 309
                  79*********************66......***************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.675260309IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.93E-16263322IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.2E-14266315IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.6E-9266309IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.96E-12267313No hitNo description
Gene3DG3DSA:4.10.280.101.9E-15267322IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048734.39E-5393453No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010440Biological Processstomatal lineage progression
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0050826Biological Processresponse to freezing
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 464 aa     Download sequence    Send to blast
MMSSSWASME AETEHQQQTH NDRDFTSLCS FNNNLPFMEV DDVNDIMMMM TMMRDMSNFF  60
PEPDTTNNNN LVLLHHHSSS SSSSSSSSSH LQCFLPPPPP PNPFDMPTMA SFLDPHQASI  120
TATTDFGGFH HHNLEELGSC SSSGKPAPPP PPPLFFNRSK ILRPLDDSLP PSGAQPTLFQ  180
KRAALRKNNS SSQQQQGGVL GEDDNNNNKN SMKRKVMMEM EDNGSFDGSS AFNYDSGDDL  240
IETNNKKNNQ KGGGGKNKKG MPAKNLMAER RRRKKLNDRL YMLRSVVPKI SKMDRASILG  300
DAIEYLRELL QRINELHNEL ESSSSTSTNS GSGSVMTAVP TVVASSSFYP LTPTPPSLPT  360
RIKEEICPTS LPSPNAQPPR VDVRLREGRA VNIHMFCGRK AGLLLSTMRA LDTLGLDIQQ  420
AVISCFNGFA LDIFRAEQCK EGQDVHPEQI KAVLLDTAGY PAII
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1268275ERRRRKKL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015937933.10.0PREDICTED: transcription factor SCREAM2-like
SwissprotQ9LSE21e-114ICE1_ARATH; Transcription factor ICE1
TrEMBLB8XJY51e-144B8XJY5_SOYBN; BHLH transcription factor
STRINGGLYMA04G37750.21e-144(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24143482
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26744.41e-104bHLH family protein