PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.CDI4M
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 278aa    MW: 31357 Da    PI: 8.3614
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.CDI4MgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY764.6e-24117177259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  dD y+WrKYGqK++ +s fprsY+rC+ +   gC++ k+v++++e+p + ++tY+g H+++
  Aradu.CDI4M 117 DDNYTWRKYGQKQILSSIFPRSYFRCSRKyeeGCRAIKQVQKTQENPIMYQTTYTGMHTCK 177
                  8**************************988899**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182907.45E-23113178IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.0E-23114178IPR003657WRKY domain
SMARTSM007742.5E-31116178IPR003657WRKY domain
PfamPF031062.0E-22117177IPR003657WRKY domain
PROSITE profilePS5081119.485117179IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MDNTTTLCTK INSDSEKSKI TRELLNGHEA ATQLKLLLLK NPNGGSSLSA EELLANVLRS  60
FNEILSILSS QNAGIKAADD SDQCKNKRTA TKTARGRGCY KRRSSPDTWT IVSLTADDNY  120
TWRKYGQKQI LSSIFPRSYF RCSRKYEEGC RAIKQVQKTQ ENPIMYQTTY TGMHTCKSTP  180
NSNNNVPRLL VNSQNHHHDS KVSNEKDYYP IISPLTPTVT QEHAKEDSPS DVGDHKLDPV  240
WSDLKDFEPS IKPSINLVKN FGTHDDDVFH HFDAFLAS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015933001.10.0PREDICTED: probable WRKY transcription factor 70
TrEMBLA0A151SG473e-68A0A151SG47_CAJCA; Putative WRKY transcription factor 70
STRINGGLYMA14G36430.22e-67(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47003056
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.13e-37WRKY DNA-binding protein 70