PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.CAP3X
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 232aa    MW: 26431.4 Da    PI: 4.854
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.CAP3XgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY47.53.5e-15581101059
                  EEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY  10 YGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  YGqK +++ +++r+Y+rCt++   gC+++k v+r +e p +   tY+g+H+++
  Aradu.CAP3X  58 YGQKAIQNEKYTRNYFRCTHKyeqGCQATKYVQRIQEKPPLYRATYHGRHTCT 110
                  ********************99999**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.1E-1643110IPR003657WRKY domain
PROSITE profilePS5081113.89644107IPR003657WRKY domain
SuperFamilySSF1182903.14E-1657110IPR003657WRKY domain
PfamPF031063.4E-1557109IPR003657WRKY domain
SMARTSM007744.7E-1758111IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
MKMIMEDDDI ISREDGIKAI IEEELVRGRD FANQLRQRIV TNKEDDDSAD HQRLLSNYGQ  60
KAIQNEKYTR NYFRCTHKYE QGCQATKYVQ RIQEKPPLYR ATYHGRHTCT NTDTTNNHVL  120
IMEELDHPTS SSSSSIFLSF DNSFPNPPTN PFLSPSSSSL FPSTAPPLPP MMIMEEDRQV  180
LPSTTSTHPV LDDSSRHHVV PILSSSEDNN ICWDDMMIAA MSQVLYGSVD EG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015948329.11e-103PREDICTED: probable WRKY transcription factor 70
TrEMBLV7APM32e-32V7APM3_PHAVU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2929022
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-16WRKY DNA-binding protein 70