PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.C0BW2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 133aa    MW: 15031.5 Da    PI: 8.6485
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.C0BW2genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY33.96.2e-11110131122
                  ---SS-EEEEEEE--TT-SS-E CS
         WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                  ldDgy+WrKYGqK vk++++pr
  Aradu.C0BW2 110 LDDGYRWRKYGQKAVKNTTYPR 131
                  59*******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.0E-1197131IPR003657WRKY domain
SuperFamilySSF1182904.58E-9104132IPR003657WRKY domain
PROSITE profilePS5081112.61105133IPR003657WRKY domain
PfamPF031062.0E-7111132IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    Send to blast
MEPQSHPNDN NNNNNSLGCD INDDYYWSNI SYVFSGGNGG AGHNNVSDAK ETITSAMECG  60
SSSLHPSFNM AENVIEEKEK KEKKNIVGRV KKAKRVARFA FQTRSVDDIL DDGYRWRKYG  120
QKAVKNTTYP RYV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015961857.11e-94PREDICTED: probable WRKY transcription factor 24 isoform X1
RefseqXP_015961859.11e-94PREDICTED: probable WRKY transcription factor 3 isoform X3
TrEMBLV7B5N22e-27V7B5N2_PHAVU; Uncharacterized protein (Fragment)
STRINGGLYMA09G39000.11e-24(Glycine max)
STRINGGLYMA18G47350.12e-24(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32273471
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41570.11e-15WRKY DNA-binding protein 24