PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.B1KKT
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 470aa    MW: 51900.3 Da    PI: 7.8955
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.B1KKTgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.83.1e-30192251159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  ++Dg++WrKYGqK  kg+++pr+YYrCt a  Cpv+k+v+r+aed +++++tYeg+Hnh+
  Aradu.B1KKT 192 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApACPVRKQVQRCAEDLSILITTYEGTHNHP 251
                  58***************************99****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.0E-31178253IPR003657WRKY domain
SuperFamilySSF1182903.27E-27185253IPR003657WRKY domain
PROSITE profilePS5081128.369187253IPR003657WRKY domain
SMARTSM007745.8E-36192252IPR003657WRKY domain
PfamPF031068.7E-27193251IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006952Biological Processdefense response
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    Send to blast
GYYVKLEERS TTRDITIMEE KRVSAISFED FVTKGEVKEE NGRLKMITER VEENYHSLQL  60
QFFDIFTKKA FKEVVSDSAT NTIGDETEEE HELVSLCLGR NPSKHNKDVA RIGNNSKNKV  120
NKENEEFEKP CLTLGLDSKC VLPKESAEET LSSITQKHQV KVKNSSNDGS SDQMAAKRAR  180
VSVRARCDSP TMNDGCQWRK YGQKIAKGNP CPRAYYRCTV APACPVRKQV QRCAEDLSIL  240
ITTYEGTHNH PLPFSASAIA STTSAAASML ISGSSESHNS SFFKNVSTLH SGVTGVCLGQ  300
QFDQSRATKN VFLPNNNVTL DLTSSASNTL LPSNTSSANL FTMPIPFEEK THIIRPVMLR  360
NSSSWGKHFY EEYIRNQTLH PPKDAFLAET ITKAMKTDPS LHSVIAAAVS SIVGQQGYST  420
SCNNQEGTEI LIPSTQLGSS IPFNQSNKGY IEGYFKRLLS SSSGAGDMLP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-21179253174WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1462312e-54BT146231.1 Lotus japonicus clone JCVI-FLLj-21B16 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015962794.10.0PREDICTED: probable WRKY transcription factor 72
TrEMBLI1L5Z41e-125I1L5Z4_SOYBN; Uncharacterized protein
STRINGGLYMA09G37470.11e-125(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65034134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.11e-47WRKY DNA-binding protein 72