PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.A205B
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 174aa    MW: 19275.3 Da    PI: 8.2592
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.A205BgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY34.15.3e-11144165122
                  ---SS-EEEEEEE--TT-SS-E CS
         WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                  ldDgy+WrKYGqK+vk+s +pr
  Aradu.A205B 144 LDDGYKWRKYGQKVVKNSLHPR 165
                  59*******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.4E-12129165IPR003657WRKY domain
SuperFamilySSF1182907.59E-10136165IPR003657WRKY domain
PROSITE profilePS5081112.771139165IPR003657WRKY domain
SMARTSM007740.0013144173IPR003657WRKY domain
PfamPF031063.3E-7145165IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    Send to blast
MGFVHFEDHN QVLSFLTPSL AAPPSLSHHS LEDVRGDSNS TANTIIAAAT TSTATATVTA  60
TTTAGFGHDE LVPRTTWKND DQVRSMDPKG MNNNNDENCT GNSSDGNNSS WWKNGGSEKG  120
KVKVRRKLRE PRFCFQTRSD VDVLDDGYKW RKYGQKVVKN SLHPRIPPLM NDII
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1122128KVRRKLR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU3753471e-47EU375347.1 Glycine max transcription factor (WRKY38) mRNA, complete cds.
GenBankBT0916801e-47BT091680.1 Soybean clone JCVI-FLGm-8F17 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015938773.11e-121PREDICTED: probable WRKY transcription factor 12
TrEMBLA0A0B2PRL93e-60A0A0B2PRL9_GLYSO; Putative WRKY transcription factor 12
STRINGGLYMA03G25770.16e-59(Glycine max)
STRINGGLYMA07G13611.17e-59(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF72943245
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44745.15e-27WRKY family protein