PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.9L7NB
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 344aa    MW: 38767.3 Da    PI: 6.2375
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.9L7NBgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.61.7e-30222281159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  ++Dg++WrKYGqK  kg+++pr+YYrCt a gCpv+k+v+r+ +d +++++tYeg+Hnh+
  Aradu.9L7NB 222 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLDDMSILITTYEGTHNHP 281
                  58***************************99****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.809.3E-33207283IPR003657WRKY domain
SuperFamilySSF1182901.24E-27216283IPR003657WRKY domain
PROSITE profilePS5081129.103217283IPR003657WRKY domain
SMARTSM007742.0E-37222282IPR003657WRKY domain
PfamPF031061.5E-27223281IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MKTDLSLQID AEQEQENKLE YDVDVEEEMK QTQLQLEAGE IEEHVVSLQD NKNYKTREQE  60
EDLNVLQMEM DRIKEENQAL RKLVEQTMKD YYDLQMKISN NYNNKNNKDL EISVQRASPT  120
IHDDDDELSL SLRLNNTSST SWRIHQQERV TDNIINEKLI SSFASSSSSP PLQNKLIIRG  180
TTNDDTAITT HHHHHLSAAA STTTPNRKPR VSVRARCEEA KMNDGCQWRK YGQKIAKGNP  240
CPRAYYRCTV APGCPVRKQV QRCLDDMSIL ITTYEGTHNH PLPVGATAMA ATASAPASFT  300
LSHGVSASQP HFPWITNNNN VSAIASDPNK FKVAVAAAIT TLFT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-222222851476WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015943356.10.0PREDICTED: probable WRKY transcription factor 9 isoform X1
SwissprotQ9C9F08e-69WRKY9_ARATH; Probable WRKY transcription factor 9
TrEMBLA0A0B2S4P31e-88A0A0B2S4P3_GLYSO; Putative WRKY transcription factor 9
STRINGVIT_12s0055g00340.t012e-77(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF93203141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.12e-53WRKY DNA-binding protein 9