PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.9C8PR
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 447aa    MW: 48652.6 Da    PI: 4.5356
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.9C8PRgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.81.2e-053293661254
                  HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  Aradu.9C8PR 329 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 366
                  677888999*******998.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.973317366IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.7E-11327379IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.03E-5327370No hitNo description
Gene3DG3DSA:4.10.280.108.4E-9331374IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 447 aa     Download sequence    Send to blast
MAEEFQATIC GDNYWWNSNK SLFSLMGGSM TCSVAAANDS ANNYDSFWQG SDFMDFKGAT  60
TKSSFKGEDT NKCSNNESST SASAVAGGTV GSIFINSTSQ MMSDGLSSSP SFTWNNPSLF  120
GCNERSENNF QSIVIQEETG LDPSNNNSQQ IQQQQEFSNS MGSGFTIESS LSASYDYPLM  180
QAGLFGSTDS SSSLFTTNQP TLPELSPIWS TVSSFMKPSS FMEPKQLNGL QFSNNTPFCN  240
ASTEETLYSI RSDIFSSSSS QPQLYQTPPT TFDNSKPNNA LTSTPLNKLK REESPEKASS  300
SVCSKNVSGR VFKKTRIETP SPLPTFKVRK EKLGDRITAL QQLVSPFGKT DTASVLHEAI  360
EYIKFLHDQV NVLTAPYMKN GSSIQDQQGC DYEKDSKCLT QDLNSRGLCL VPVASTFPMA  420
TETTADFWTP TFGNSLIGNV AVAGSHQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.9C8PR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015943476.10.0transcription factor bHLH112
TrEMBLA0A445BB190.0A0A445BB19_ARAHY; Uncharacterized protein
STRINGXP_007148280.11e-118(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF111833106
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.34e-50bHLH family protein