PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.85INT
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 198aa    MW: 21446.1 Da    PI: 9.1862
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.85INTgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH345.3e-1177124455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  Aradu.85INT  77 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 124
                  8*************************9....677*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.74E-1071128No hitNo description
SuperFamilySSF474593.27E-1871142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.8E-1973145IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.82873123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.3E-877124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-1079129IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    Send to blast
NDSYGNKHRK LEGSFQEENR AGDSKAEVGA SLVAGNKLAR QGGGGGGGGG AAKPSCEQPP  60
KQDYIHVRAR RGQATDSHSL AERARREKIS ERMKILQDLV PGCNKVIGKA LVLDEIINYI  120
QSLQRQVEFL SMKLEAVNSR LNMNSVVECF PSKDVQVGNQ PFDIAGMIFG SQATRGYAQG  180
SQSGWLHMQL GGDFDRVA
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.85INT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015970009.11e-146transcription factor bHLH79 isoform X1
RefseqXP_020997809.11e-146transcription factor bHLH79 isoform X1
RefseqXP_020997813.11e-146transcription factor bHLH79 isoform X1
RefseqXP_025603145.11e-146transcription factor bHLH79 isoform X1
RefseqXP_029154439.11e-146transcription factor bHLH79 isoform X1
SwissprotQ69WS35e-71BH094_ORYSJ; Transcription factor BHLH094
TrEMBLA0A445B0661e-136A0A445B066_ARAHY; Uncharacterized protein
STRINGGLYMA17G10290.13e-92(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF117134105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.13e-69BIG PETAL P