PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.4K13K
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family G2-like
Protein Properties Length: 207aa    MW: 23423.7 Da    PI: 10.9203
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.4K13KgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like956e-302683155
      G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPkti...lelmkvkgLtlehvkSHLQkYRl 55
                 k+rlrWt+eLH+rFv+av++LGG+++AtPk i   +++m+v +L+++hvkSHLQkYR+
  Aradu.4K13K 26 KERLRWTHELHDRFVHAVNRLGGPDRATPKGIlkgMKAMGVSDLSIYHVKSHLQKYRI 83
                 68******************************33345788999**************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.3192386IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.6E-272484IPR009057Homeodomain-like
SuperFamilySSF466891.97E-152683IPR009057Homeodomain-like
TIGRFAMsTIGR015571.3E-222684IPR006447Myb domain, plants
PfamPF002494.2E-82882IPR001005SANT/Myb domain
PfamPF143794.9E-10115154IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    Send to blast
MVLGLRPQKK RAVMGSTRSD GSANGKERLR WTHELHDRFV HAVNRLGGPD RATPKGILKG  60
MKAMGVSDLS IYHVKSHLQK YRISKLIPES TSKGKPEKRS ISNTLPNFSS TCALQLKEIL  120
QIQREVRNRL SDQAEVQRRL KQKIEAQEKY LDRIGQSHES RTTITRKSSK PSSFCATNNN  180
NNKHLPSLSE ESESIIETHP HVPKDKG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A3e-212585158Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B3e-212585158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A3e-212585158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C3e-212585158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D3e-212585158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F3e-212585158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H3e-212585158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J3e-212585158Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.4K13K
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020996285.11e-145myb family transcription factor PHL7 isoform X1
RefseqXP_025695564.11e-145myb family transcription factor PHL7 isoform X1
SwissprotQ9SJW06e-45PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A445DFN31e-144A0A445DFN3_ARAHY; Uncharacterized protein
STRINGXP_004514212.11e-82(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106592535
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.13e-47G2-like family protein