PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.455QS
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 287aa    MW: 33016.6 Da    PI: 4.7647
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.455QSgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.12.4e-3057115259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+ver+++d ++++itY+++Hnh+
  Aradu.455QS  57 SDFWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERCRTDASMIIITYTSTHNHP 115
                  699***********************9988****************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.1E-3149117IPR003657WRKY domain
PROSITE profilePS5081132.09951117IPR003657WRKY domain
SuperFamilySSF1182901.96E-2652117IPR003657WRKY domain
SMARTSM007747.7E-3656116IPR003657WRKY domain
PfamPF031063.5E-2558115IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    Send to blast
MDANVSTKLE SEETSEELKS SETQASKKRK MVEKTVVRVR IGEGNNISRL KNEGLPSDFW  60
SWRKYGQKPI KGSPYPRGYY RCSTSKGCSA KKQVERCRTD ASMIIITYTS THNHPSPDAI  120
ISTQNLSQKP KEQEGGETTE EELSKVEEQE QEHEHEHEHE QVEEEHSTDH EKPSTTTVSM  180
ATADEKSFHY LQSPISSHED IVVVDQEDPF KLSSEKSHER IDLLLEEEEP LCYAQIKNLT  240
TKKSDELDFF DELEELPMSS PFLHFTRSIL SDERIPVFPX XXXCIYL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A7e-17571171574WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU0195771e-73EU019577.1 Glycine max WRKY41 (WRKY41) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015968885.10.0PREDICTED: probable WRKY transcription factor 65
TrEMBLA0A0R0ERD01e-122A0A0R0ERD0_SOYBN; Uncharacterized protein
STRINGGLYMA19G40470.11e-121(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF97083241
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.13e-36WRKY DNA-binding protein 35