PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.3ZC2Z
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family G2-like
Protein Properties Length: 301aa    MW: 34185.9 Da    PI: 7.2954
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.3ZC2ZgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like88.75.5e-281969255
      G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                 prlrWtpeLH++Fv+a+++LG   +AtPk +l+lm+vkgLt++hvkSHLQ+YR+
  Aradu.3ZC2Z 19 PRLRWTPELHRCFVHAIDSLG---EATPKLVLQLMDVKGLTISHVKSHLQMYRS 69
                 8*******************4...79***************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.0791572IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.6E-281571IPR009057Homeodomain-like
SuperFamilySSF466895.2E-141769IPR009057Homeodomain-like
TIGRFAMsTIGR015579.3E-211969IPR006447Myb domain, plants
PfamPF002494.1E-82068IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
MATCGREGAV RQYIRSKVPR LRWTPELHRC FVHAIDSLGE ATPKLVLQLM DVKGLTISHV  60
KSHLQMYRSM RGDLGRQGRI SSSQHRNQSF EEHDDGCVEE VNDVNNNNNN HNQNYHPCSQ  120
SIGKESDSLF GYSNFSPKRA RIERNYSISQ NLQCRNQRTV PYPYSFYDYA YSTQQQQHQP  180
PHSTVFPMLP PLLGNFLQVT KLNDRETTSE PMTNNNNNNN NVLLNINKNN NTEKKARAEE  240
DEDEDVGREC ELSLSLTLPN PSPQRSSNVS SASEITEAAI SSSCSTTLKH RINLDLSLSL  300
C
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A3e-172071458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B3e-172071458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A3e-172071357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B3e-172071357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C3e-172071357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D3e-172071357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A3e-172071458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C3e-172071458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D3e-172071458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F3e-172071458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H3e-172071458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J3e-172071458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.3ZC2Z
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0982252e-87BT098225.1 Soybean clone JCVI-FLGm-16F9 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015942201.10.0putative Myb family transcription factor At1g14600
TrEMBLA0A445BEA10.0A0A445BEA1_ARAHY; Uncharacterized protein
STRINGGLYMA20G24290.11e-107(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55393353
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14600.13e-31G2-like family protein