PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.3LS9D
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family G2-like
Protein Properties Length: 251aa    MW: 27595.1 Da    PI: 5.7125
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.3LS9DgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like32.32.3e-1093118227
      G2-like   2 prlrWtpeLHerFveaveqLGGsekA 27 
                  prl+Wtp+LH +Fv+++++LGG+e  
  Aradu.3LS9D  93 PRLCWTPNLHLSFVHVIQRLGGQESS 118
                  8*********************9976 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.7E-889117IPR009057Homeodomain-like
SuperFamilySSF530983.22E-6166236IPR012337Ribonuclease H-like domain
PfamPF134563.2E-5199238No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
MSKGFEIHQE NNEGNGGKSS NDNEGEENSF DINEGVAMSD DGELEEENNN EAKEEEDDNN  60
EEGNLTNPSS SSTASREGKR GSGVRQYVRS KMPRLCWTPN LHLSFVHVIQ RLGGQESSLS  120
RQLSVQSSFA EAAVMTVILA LVLEKLKPYG GLQESFESAK AISVGASKGV QRLGNQLLMV  180
LQNTKIKLHL RLREGVGIAP CNAAEYRAMI LGMRYALKKG FSFIRIQGDS KLVCMQFSCI  240
QVTVAQQLLH L
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.3LS9D
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2351882e-37AC235188.1 Glycine max strain Williams 82 clone GM_WBb0010N12, complete sequence.
GenBankAC2353092e-37AC235309.1 Glycine max strain Williams 82 clone GM_WBb0069M12, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025640443.12e-75probable transcription factor GLK2
TrEMBLA0A445B7561e-135A0A445B756_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1662323
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.11e-12G2-like family protein