PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.3A6ZT
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family GeBP
Protein Properties Length: 354aa    MW: 39582.5 Da    PI: 8.4277
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.3A6ZTgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573828.5e-26114210297
       DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkks..isfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                  lfqr+++eeD i +L+Gl +f aktgk+p++ +d+fy+f+k+s  i ++vs  ql +KirrLKkKf+++ +k k+gk  +  k+h+ ++f+l k +Wg
  Aradu.3A6ZT 114 LFQRVFNEEDAIGILKGLSEFIAKTGKEPYKCVDEFYDFMKGSnlIRANVSCMQLKDKIRRLKKKFENNLEKEKNGKG-TTLKPHELEAFQLEKNVWG 210
                  79**************************************9755599*************************888887.6779**************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045047.0E-24115210IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    Send to blast
PQSEQEDSSE VEEAATSSDE DEDIDEGEDE REKHVLVPKK LQPQKVSKLS SSSSKPSPKL  60
KSQPSASVSQ TKSGSKRAAK NSIDHSNQPK RGKKAQEDHA IGSIEEDPQK SKSLFQRVFN  120
EEDAIGILKG LSEFIAKTGK EPYKCVDEFY DFMKGSNLIR ANVSCMQLKD KIRRLKKKFE  180
NNLEKEKNGK GTTLKPHELE AFQLEKNVWG HDGRGGEAVL KETTEKDTVN NEKAAKITPK  240
KARMSEFSVT SLALTSMLIY DGTFGKTFGK DYIRKGIELL GVSKREDIEA RWRKFKDAEN  300
KLYAEIAEFY AEQAKLIYQA NSSSSSYIVK DDTLSKTGRS VSSICGICNC MNLV
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.3A6ZT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016176119.11e-180probable transcription factor At1g11510 isoform X1
RefseqXP_025676135.11e-180probable transcription factor At1g11510
TrEMBLA0A445C6H31e-173A0A445C6H3_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18313490
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.13e-14DNA-binding storekeeper protein-related transcriptional regulator