PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.38JU0
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 336aa    MW: 37941.9 Da    PI: 6.7543
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.38JU0genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.11.2e-1187138155
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +r+ h  +Er+RR+ +N+ ++ Lr+l+P++   + ++ + a+i+  A+e++k+L+
  Aradu.38JU0  87 QRMIHITVERNRRKLMNEHLAVLRSLMPES---YVQRGDQASIVGGAIEFVKELE 138
                  6899**************************...9******************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.31E-1585156IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.74E-1185142No hitNo description
Gene3DG3DSA:4.10.280.101.4E-1285141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.05686137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.9E-987138IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-892143IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MALLEDHHHL SSSNEFSNFV VYDTISATPF SSHGSSSTSF LVEENKVEEY GERTTTRKRQ  60
SGEAGQGKKK RRRKPRVCKN KEEAENQRMI HITVERNRRK LMNEHLAVLR SLMPESYVQR  120
GDQASIVGGA IEFVKELEQL LQCLEAQKLK LVHQGMAAQQ SNKNNNEDEL MMMMMMVMGS  180
APFSHFFVHP QFTWSQAPNK YASHHNKTNN NNNNNQAAMA DIEVTLIETH ANLRILSRKS  240
PKQLSKLLSG FQNLSLTILH LNVTSMDPLV LYSISAKVEE ECQLGSVDDI ASAVHNLLKM  300
IEEEDSLCSL YGEVTKSTPS PLQDSLENSN TEYSLS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15673RKRQSGEAGQGKKKRRRK
26772KKKRRR
36773KKKRRRK
46774KKKRRRKP
56873KKRRRK
68798RMIHITVERNRR
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. May be involved in the differentiation of stomatal guard cells. {ECO:0000269|PubMed:17088607}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.38JU0
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015963288.10.0transcription factor bHLH71
SwissprotQ56XR02e-69BH071_ARATH; Transcription factor bHLH71
TrEMBLA0A4P1RGY51e-125A0A4P1RGY5_LUPAN; Uncharacterized protein
STRINGXP_007156419.11e-123(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106443138
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.11e-60bHLH family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]