PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.2V4EQ
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 313aa    MW: 35485.3 Da    PI: 5.0037
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.2V4EQgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.14.1e-2979139158
                  ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                  ++Dgy+WrKYGqK++ g++fpr+Y+rCt++   gC ++k+v++s+edp+v+eitY+g+H++
  Aradu.2V4EQ  79 MEDGYSWRKYGQKDILGAKFPRGYFRCTHRhvqGCLATKQVQKSDEDPNVLEITYKGRHTC 139
                  58***************************99999*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.5E-2775140IPR003657WRKY domain
SuperFamilySSF1182901.44E-2478139IPR003657WRKY domain
SMARTSM007746.9E-4179141IPR003657WRKY domain
PROSITE profilePS5081121.3179137IPR003657WRKY domain
PfamPF031061.4E-2680139IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MEQILSTYEK VLTMLSNTNF MKDSSHCSSS SLANGSTKSE VLDKEDVAKH KQVSKKRKTM  60
SMWTKQVRVC LGTELDGSME DGYSWRKYGQ KDILGAKFPR GYFRCTHRHV QGCLATKQVQ  120
KSDEDPNVLE ITYKGRHTCI QVSHHSKNPT ISKPNMALLL EEQPKNHQPT QKEMKTEQPT  180
HETILTFGTS QELEVKLDDF DFDFDPDTKE NIFSSLCFTS PSIVSENDED NNKMFSYIES  240
FSPEFISPTT NSESNNIFHF NDGLGLCVQT SDSDFSDNVS APTSSVSNSS IEGLDFHSFD  300
EKVDFDNYYS INS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015937960.10.0PREDICTED: probable WRKY transcription factor 46 isoform X1
TrEMBLA0A0B2Q2Y91e-95A0A0B2Q2Y9_GLYSO; Putative WRKY transcription factor 46
TrEMBLI1MKL21e-95I1MKL2_SOYBN; Uncharacterized protein
STRINGGLYMA16G02960.14e-95(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49334157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24110.19e-41WRKY DNA-binding protein 30