PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.259PC
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 366aa    MW: 41925.6 Da    PI: 5.6472
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.259PCgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.11e-29130190259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  +DgynWrKYGqK++ g+++prsYYrCt++   gC+++k+v+rs+edp++++itY+g+H+++
  Aradu.259PC 130 EDGYNWRKYGQKDILGAKYPRSYYRCTFRntqGCWATKQVQRSDEDPTIFDITYKGRHTCS 190
                  8**************************998889**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081122.779124187IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.4E-29126191IPR003657WRKY domain
SuperFamilySSF1182908.63E-26128191IPR003657WRKY domain
SMARTSM007743.1E-41129191IPR003657WRKY domain
PfamPF031068.2E-27130189IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    Send to blast
MENDGRWEQN ILINELVQGM EVARRLKEDM NATYSADTKD LLLQRILSSY EKALLILRWN  60
ASTSKSQNMS QATATATLFS ESPISISASP LREDNHNQEF KHDSKKRKTM AKWVDQVRVS  120
FESGLEGPHE DGYNWRKYGQ KDILGAKYPR SYYRCTFRNT QGCWATKQVQ RSDEDPTIFD  180
ITYKGRHTCS QGNKAVPQPK SPDKHEQLQC HSNEIQHRQT SEESLTTFGT IMTVKRDMVA  240
NGEMEYPFTF PSTSFGSMAQ ESYSLIPSAL ENESFLSSHF QTHLLYPNMQ EFKYLPSTSF  300
QMNELDGIYN RPLSESDITE IISTNTSTTN SPVPEFNFSL DPVEIDPNFP PNTLDFSPRA  360
LNNKNI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2lex_A4e-141301871872Probable WRKY transcription factor 4
1wj2_A4e-141301871872Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015955657.10.0PREDICTED: probable WRKY transcription factor 41
TrEMBLA0A151SV620.0A0A151SV62_CAJCA; Putative WRKY transcription factor 41
STRINGGLYMA05G36970.11e-179(Glycine max)
STRINGGLYMA08G02580.11e-179(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49334157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.13e-64WRKY family protein