PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.1QN19
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 379aa    MW: 42312.8 Da    PI: 8.0478
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.1QN19genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.57.5e-06172191120
                  CHHHHHHHHHHHHHHHHHHH CS
          HLH   1 rrrahnerErrRRdriNsaf 20 
                  +r++h ++Er+RR+++N+ +
  Aradu.1QN19 172 QRMTHIAVERNRRRQMNDHL 191
                  79****************87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.64E-9164224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.59E-6170214No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    Send to blast
MPFLQMLQSV EYSPNYSSQQ QCFFPFKDPT NFQTLLRLQH LKNHNNNNNN NNNNVQELDQ  60
KSCVTHDVMV EMQQQQQQSH SPVKSESYEL HQQHHQTSAS ASCCVENNNN NTTPTKAVTA  120
AIEKCGGRGN SNTQEVCQKS QQVGSVATTT TRERKKRKRT RPAKNKEDVE NQRMTHIAVE  180
RNRRRQMNDH LSGDQASIIG GAIDFVKELE QLLQSLEAQK RMRRKNNNNS SNKNEDAIGF  240
GSSSNSSSTT NGGYDGIMRS STTSLSLLST EEGNFGGGGG GNGDELKAEN KSESAEIEVI  300
LIQTHVNLKI QCKRRHGQLV KAIVALEDLR LSILHLNITS SSDDSVLYSL NLKIEEGCRL  360
RSANEIAEAV HHIFNFING
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1153158RKKRKR
2154159KKRKRT
3172183RMTHIAVERNRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.1QN19
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Repressed by heat treatment. {ECO:0000269|PubMed:12679534}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015948087.10.0transcription factor bHLH67 isoform X2
SwissprotQ9M1282e-55BH057_ARATH; Transcription factor bHLH57
TrEMBLA0A445EHQ00.0A0A445EHQ0_ARAHY; Uncharacterized protein
STRINGXP_007135328.11e-106(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68943449
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01460.14e-27bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]