PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.1C3SG
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 605aa    MW: 70119.5 Da    PI: 6.8115
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.1C3SGgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY67.42.1e-21160220259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  +Dg++WrKYGqK+  +s++ r+YYrC+++   gCp+ k+v+r +e+p +  +tY g+H+++
  Aradu.1C3SG 160 EDGHAWRKYGQKKTMNSKYLRNYYRCSHKhdeGCPAMKHVQRIQENPPLYRTTYYGHHTCK 220
                  8***************************99999**************************97 PP

2WRKY66.44.4e-21443503259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  +Dg++WrKYGqK+  +s++ r+YYrC+++   gCp++kkv++ +++p ++ + Y g+H ++
  Aradu.1C3SG 443 EDGHEWRKYGQKMTMNSKYLRNYYRCSHKndqGCPATKKVQQIQDNPPLFRTSYYGHHICK 503
                  8***************************99999*************************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.1E-23152221IPR003657WRKY domain
PROSITE profilePS5081119.543154217IPR003657WRKY domain
SuperFamilySSF1182901.83E-21156220IPR003657WRKY domain
SMARTSM007746.1E-33159221IPR003657WRKY domain
PfamPF031069.4E-22160220IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.6E-23432504IPR003657WRKY domain
PROSITE profilePS5081118.315437500IPR003657WRKY domain
SuperFamilySSF1182901.31E-21440503IPR003657WRKY domain
SMARTSM007749.5E-33442504IPR003657WRKY domain
PfamPF031062.4E-21443503IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 605 aa     Download sequence    Send to blast
ACGASPIFSP NLVNTFKNNS TTENHHHYSS KGRREIMEQE LLRGRDVANQ LLQLLVHRSN  60
NNDEQGLTLI LPLAEDLVHQ VLRSFTNTIL LLNISNNSNN IDDAIFPIKD LSSSSSPSSC  120
QKHEDLDEAC KSFHTNNGRG RYKRKTTAPT WEKDNPILLE DGHAWRKYGQ KKTMNSKYLR  180
NYYRCSHKHD EGCPAMKHVQ RIQENPPLYR TTYYGHHTCK NTNYYNNEES IILEHESKSS  240
MFLSFNNNNN NIIPILRSTK QEAVELVIHD HHDDHSVATH HQSQLYDHYE VDLEYSRHNN  300
QNSRGRKEII EQELLRGRDM ANQLLEVLVA HNNKSNNHHY LNRSYDDDDD KGLMVLLPYA  360
EDLVHQVLRS FTNSLLILNT TTTTKSDAID HDVFSDGRVV FDSAKFRDFS STTSSPSLHH  420
TNNNRLRKSS VPTWEKDSPI LIEDGHEWRK YGQKMTMNSK YLRNYYRCSH KNDQGCPATK  480
KVQQIQDNPP LFRTSYYGHH ICKSITYNEE TILASESFSE TSIKEHQFSS SQAFGSKNFI  540
SQNQLLLSSS DYYHPLCVYE ELGFDYSRHH DPMLYSTDEK VQFDNNALGW DLLDYDGLAC  600
YGQQN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015933198.11e-170PREDICTED: probable WRKY transcription factor 62
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2871322
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-24WRKY DNA-binding protein 70