PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.180Q6
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 485aa    MW: 53137.7 Da    PI: 6.0924
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.180Q6genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.21.1e-30245303259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                   Dg++WrKYGqK+ kg+++pr+YYrCt++ gCpv+k+v+r+aed +v+++tYeg+Hnh+
  Aradu.180Q6 245 ADGCQWRKYGQKMAKGNPCPRAYYRCTMStGCPVRKQVQRCAEDRSVLITTYEGQHNHP 303
                  7***************************99****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.0E-34229305IPR003657WRKY domain
SuperFamilySSF1182905.49E-28237305IPR003657WRKY domain
PROSITE profilePS5081130.182239305IPR003657WRKY domain
SMARTSM007741.8E-37244304IPR003657WRKY domain
PfamPF031063.3E-27246303IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 485 aa     Download sequence    Send to blast
MVHSSMELHV DTSLDLRMKN TDSNSSSMEP SETMDDKKSN DLGLLAELQH VNAENQRLRD  60
LIEELNNNYN TLHMQLINLM QQRDQNHAMK QDIEDKSKKE DMVARTFLDM GVAGFGEKDN  120
DPSQQSSDIK LGRGESKSMV ELMEHCNNNN NNNNNNNNNN NNNNNNNIVL EKDNNSNNNN  180
NKVDGGNRER NTTMVTDEGL SGWLSNKVST RLNSFRDVDQ ASETMSMIKK ARVSVRARSE  240
SSMIADGCQW RKYGQKMAKG NPCPRAYYRC TMSTGCPVRK QVQRCAEDRS VLITTYEGQH  300
NHPLPPTAKA MASTTSAAAS MLLSGSMPSA DGLINPTILE SATLPCSQNM ATLSASAPFP  360
TITLDLTQTA TNNNNNNNNY NPNSLRDLPN NQSQQLSLLT PLLAQKFMSA PNMFGHVLNG  420
DQSKIISGLQ GSIDTTTGSS FADTINAATA AITADPNFTS ALVAAISSII GNSTHHHQSS  480
NNNDA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-24231306175WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016163983.10.0PREDICTED: probable WRKY transcription factor 31
TrEMBLA0A0S3RJD01e-163A0A0S3RJD0_PHAAN; Uncharacterized protein
STRINGGLYMA08G43258.11e-146(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF139131222
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-68WRKY family protein