PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G133200.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family B3
Protein Properties Length: 169aa    MW: 18850.4 Da    PI: 8.7092
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G133200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.38.8e-1669163296
                        EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
                 B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                        fk+++ + +  ++ + +p +f + h +++  + t tl+  + g++W v++ y+++s++  ++kG   F k+ +Lk+gD++vF+l+++++  +
  Aqcoe7G133200.1.p  69 FKITLCPAYIFTASVKIPTPFKKCHLSDEGIGNTATLQVsKGGKKWPVEFYYNNHSCWK-MSKGLTAFFKESNLKVGDTCVFELINKKDVLF 159
                        555544444555569******9889778889999999994566*******99*****96.688*********************98777756 PP

                        EEEE CS
                 B3  93 vvkv 96 
                        +v+ 
  Aqcoe7G133200.1.p 160 HVHK 163
                        6655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.101.5E-1661163IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.94E-1662163IPR015300DNA-binding pseudobarrel domain
CDDcd100179.59E-1566162No hitNo description
PfamPF023624.9E-1468162IPR003340B3 DNA binding domain
PROSITE profilePS5086310.13768167IPR003340B3 DNA binding domain
SMARTSM010191.5E-568167IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    Send to blast
MASSKEDIHH RTDELGESSA YQAVEDTAPK DVPAPKQVSY DAQAIKPSQT NADENLQSAS  60
VFKSKHSFFK ITLCPAYIFT ASVKIPTPFK KCHLSDEGIG NTATLQVSKG GKKWPVEFYY  120
NNHSCWKMSK GLTAFFKESN LKVGDTCVFE LINKKDVLFH VHKCHSRY*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5FBF32e-46A0A2G5FBF3_AQUCA; Uncharacterized protein
STRINGAquca_001_00601.14e-47(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.15e-15B3 family protein