PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G028200.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family B3
Protein Properties Length: 209aa    MW: 23532 Da    PI: 9.7263
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G028200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.41.6e-101151773697
                        EEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEEEE CS
                 B3  36 ltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelvvkvf 97 
                         ++ + +++ W++++ y  +  +  + +GWk+F  +n+L++gD +vF+l+  + ++ +++v+++
  Aqcoe7G028200.1.p 115 PVILTCRNKNWKMQY-YGVGYAHQKFDSGWKNFSIDNKLNVGDGCVFELTeCStECIKFRVQIL 177
                        345566889******.7666666789**********************8854456777777666 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019364.12E-1379176IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.9E-1279177IPR015300DNA-binding pseudobarrel domain
CDDcd100179.17E-1182178No hitNo description
PROSITE profilePS5086310.46184180IPR003340B3 DNA binding domain
PfamPF023622.2E-895176IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
MSLSIIKLNA HHLVHSKSFP RASKSRPNPI FQMEFSARRD GPSEGEKSRG KAKQKIKAKT  60
NKSCINNSQQ QLDEHWPLSD KPYFHYILAD YQVQNQFLLV LPAKIHKVLP KAIVPVILTC  120
RNKNWKMQYY GVGYAHQKFD SGWKNFSIDN KLNVGDGCVF ELTECSTECI KFRVQILSGE  180
LPAELLNRGD GSNSTPDGAT PDTPIIIF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010246420.11e-40PREDICTED: B3 domain-containing protein Os04g0386900-like
TrEMBLA0A2G5E0M91e-130A0A2G5E0M9_AQUCA; Uncharacterized protein
STRINGAquca_013_00263.11e-131(Aquilegia coerulea)