PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe6G144700.5.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family B3
Protein Properties Length: 364aa    MW: 40808.7 Da    PI: 5.7414
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe6G144700.5.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.37.6e-15187599
                       -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                 B3  5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                       ++ps+v++  +l lp +f++++  k  ++ ++tl +e+g ++ vk+    ++ +  l++GW++F   ++L egD++vF+ +++++f  +v ++r
  Aqcoe6G144700.5.p  1 MLPSHVSSCFWLGLPLDFCKSYLPK--QDEMITLISENGDEYPVKY--LAHKTG--LSGGWRGFSILHKLVEGDVLVFHIIKSTSF--KVYIIR 86
                       5799******************533..5669***************..666655..9**********************9998888..888887 PP

                       S CS
                 B3 99 k 99
                       +
  Aqcoe6G144700.5.p 87 E 87
                       5 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF023621.1E-12187IPR003340B3 DNA binding domain
PROSITE profilePS5086312.506188IPR003340B3 DNA binding domain
SMARTSM010192.2E-18188IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.9E-16188IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.04E-20188IPR015300DNA-binding pseudobarrel domain
CDDcd100175.67E-23186No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    Send to blast
MLPSHVSSCF WLGLPLDFCK SYLPKQDEMI TLISENGDEY PVKYLAHKTG LSGGWRGFSI  60
LHKLVEGDVL VFHIIKSTSF KVYIIRENEL ADVDGALSLL DLDARPKLVE PDNNAGKAAI  120
TTAKKFPTKK VTFILPEEND RSTSPPVSGL DIALTSEQTG NDSEEVDSEV KLGIKLSESS  180
VEFKNVTNLE SFTVRVNGLS IDSEIPKFVK TKYYDLCCSQ NAFLHDHLPK VINCKLVAGI  240
ISETVNISDA IAAGKLTTPQ KELTIWDKSL IAFEQLGMNV GFLRTRLQQL MNLARESEQA  300
MDSKRYREAL IRKSQVEEEI RTTKSKLSEL REASKKFETE IEDLKVKAER YELRFQAEAS  360
AHW*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006339907.11e-121PREDICTED: B3 domain-containing protein Os01g0234100-like
TrEMBLA0A2G5DS690.0A0A2G5DS69_AQUCA; Uncharacterized protein
STRINGAquca_015_00099.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.11e-37B3 family protein