PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G283100.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family B3
Protein Properties Length: 150aa    MW: 17125.5 Da    PI: 6.392
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G283100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.51.8e-1129109286
                        EEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                 B3   2 fkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldg 86 
                          +lt+s+v++  ++ +pkkf       +        + l + + + ++ +   ++ +     +tkGW++Fv+a +LkegD++vF+ ++
  Aqcoe5G283100.1.p  29 THILTKSNVSEVFNMQIPKKFHPFLpfySV---D--RVNLIH-NKQIFKTET--QNDRHDhLKFTKGWRDFVRALNLKEGDSCVFEIIK 109
                        567889999999999999999755453221...2..355555.556777777..343333389***********************765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019366.87E-1523110IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.109.6E-1424110IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS508639.5328126IPR003340B3 DNA binding domain
PfamPF023628.3E-930109IPR003340B3 DNA binding domain
CDDcd100172.30E-1131106No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    Send to blast
MAGSSSGSAR AINSCEHKPL QEDTHWLWTH ILTKSNVSEV FNMQIPKKFH PFLPFYSVDR  60
VNLIHNKQIF KTETQNDRHD HLKFTKGWRD FVRALNLKEG DSCVFEIIKP LPSDPIEIMV  120
QILSGDLPEE LITREANRGT SDESPIIID*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5C7I81e-107A0A2G5C7I8_AQUCA; Uncharacterized protein
STRINGAquca_082_00029.11e-107(Aquilegia coerulea)