PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G171100.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family B3
Protein Properties Length: 499aa    MW: 56852.6 Da    PI: 10.2568
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G171100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.81.7e-1727115398
                        EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                 B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                        k+ ++s+  + ++l+lp kf++++g++   s   +l+ ++g++W v+l  rk+++++++ +GW+eFv+   + +g f+vFk++g+s+f  +v
  Aqcoe5G171100.1.p  27 KI-IHSNIIQDQCLILPLKFIQKFGND--VSNAAILKVSDGKRWHVEL--RKTDSQIMFHNGWQEFVDYYSISTGHFLVFKYIGNSTF--RV 111
                        44.4788888899***********877..4558999************..**********************************9999..77 PP

                        EEE- CS
                 B3  95 kvfr 98 
                         +f+
  Aqcoe5G171100.1.p 112 FIFD 115
                        7776 PP

2B351.91.3e-162052841397
                        TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                 B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                        +g l++p +f++++  +  + + ltle ++g +W v +i  ++  ++ l+kGWk Fvk+n Lk+gD++vF+++++  +  +v++ 
  Aqcoe5G171100.1.p 205 LGYLRIPTHFTKRYLTD--SLRNLTLEVSEGHRWLVGCILYRG-HGIRLSKGWKMFVKENSLKVGDVCVFEMIKH--ALWKVHIS 284
                        56799*********655..4457***************65433.3578***********************8763..32456655 PP

3B349.67.2e-163564441399
                        TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.........EEETTE....EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                 B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.......rkksgr....yvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                        ++ l++p +f ++h  +  +   ltle ++g +W+v   +       +         + l+kGW++Fv++n+L+egD++vF++++  ++  +
  Aqcoe5G171100.1.p 356 LHYLRIPVRFSARHLDN-LR--SLTLEVSEGHRWSVSGFVynstikgK----YistnVHLSKGWQKFVRENNLREGDVCVFEMIK--GTLWK 438
                        4679*******999444.33..6*************995556554333....133458888*********************876..34356 PP

                        EEEE-S CS
                 B3  94 vkvfrk 99 
                        v++ rk
  Aqcoe5G171100.1.p 439 VHISRK 444
                        777766 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd100172.23E-1623115No hitNo description
PROSITE profilePS5086313.98724117IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.108.3E-2224118IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.61E-2124124IPR015300DNA-binding pseudobarrel domain
PfamPF023623.1E-1525115IPR003340B3 DNA binding domain
SMARTSM010191.0E-1425117IPR003340B3 DNA binding domain
SuperFamilySSF1019365.89E-21191286IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.7E-21193286IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086313.324193287IPR003340B3 DNA binding domain
CDDcd100172.04E-16194275No hitNo description
SMARTSM010194.6E-11196287IPR003340B3 DNA binding domain
PfamPF023627.6E-15205285IPR003340B3 DNA binding domain
SuperFamilySSF1019362.35E-19341445IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.104.1E-20342445IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086312.196344445IPR003340B3 DNA binding domain
CDDcd100173.42E-16345443No hitNo description
SMARTSM010191.8E-6347445IPR003340B3 DNA binding domain
PfamPF023623.1E-13355444IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 499 aa     Download sequence    Send to blast
MCLKHHPQTT QVKQKKKKMK KGFEFCKIIH SNIIQDQCLI LPLKFIQKFG NDVSNAAILK  60
VSDGKRWHVE LRKTDSQIMF HNGWQEFVDY YSISTGHFLV FKYIGNSTFR VFIFDTTCSE  120
IGYPNNVDNL KEPNCGEEIE DKRLCNSHCD ANGINSSKKQ EEFAVIPSVK GHSPTKTPVT  180
RKSALVGKQK DGVRSFRVVI KASYLGYLRI PTHFTKRYLT DSLRNLTLEV SEGHRWLVGC  240
ILYRGHGIRL SKGWKMFVKE NSLKVGDVCV FEMIKHALWK VHISRKGTSS PTFFEEEDEH  300
HSTAKQRKGV VVPIPERHLC AKAFVTSKEK TGTTEASRVL KLKHPSFRAV IKSSYLHYLR  360
IPVRFSARHL DNLRSLTLEV SEGHRWSVSG FVYNSTIKGK YISTNVHLSK GWQKFVRENN  420
LREGDVCVFE MIKGTLWKVH ISRKSKNVLP TLVKEEEDGH HSPAEQGKGG VVPILERHCC  480
GKASLTSKEK TRAVEAST*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5EKB60.0A0A2G5EKB6_AQUCA; Uncharacterized protein
STRINGAquca_007_00471.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-39B3 family protein