PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G063500.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family B3
Protein Properties Length: 159aa    MW: 18278.3 Da    PI: 8.888
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G063500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B333.47.9e-11751333896
                        EEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEEE CS
                 B3  38 ledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelvvkv 96 
                        +   ++r W  ++   ++s++ +  +GW+ Fv +n Lk+gD +vF+l+ ++ +  +++v++
  Aqcoe3G063500.1.p  75 VLACRNRNWMTNY--MGNSNKRFDVTGWRIFVTDNMLKVGDGCVFELMeWStKLIKFKVQI 133
                        34457899*9999..66666644555********************885654555555555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019362.35E-1238133IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.107.7E-1338135IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086310.53242137IPR003340B3 DNA binding domain
CDDcd100173.41E-1145135No hitNo description
PfamPF023624.9E-950132IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    Send to blast
MEFLARRSIH GYTDKGKGKM KQKHSQSFDC DEHQPLEDKP YMLFIMAKYH VGNPYQLVLP  60
VKINRLLPEA TVPVVLACRN RNWMTNYMGN SNKRFDVTGW RIFVTDNMLK VGDGCVFELM  120
EWSTKLIKFK VQILDGDLPP ELFQKCYGNT SAAPITIE*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5E0M93e-44A0A2G5E0M9_AQUCA; Uncharacterized protein
STRINGAquca_013_00263.14e-45(Aquilegia coerulea)