PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G399600.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family B3
Protein Properties Length: 180aa    MW: 20309.3 Da    PI: 8.1189
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G399600.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.24.1e-1512931198
                       HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                 B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                       ++ ++l +p +f+eehg++   s   +l+ ++g +W++ l  r+  gr+v+ +GWkeF++   L++g  + F+++g+s+f   v +++
  Aqcoe1G399600.2.p 12 SEDCQLEVPSEFVEEHGNQ--LSDVGVLKVRTGDTWNIGL--RRFAGRIVFNGGWKEFADHYSLDAGYCLFFTYSGNSRF--DVVICD 93
                       67899***********877..666778888**********..**********************************9999..777776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086311.998295IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.3E-18494IPR015300DNA-binding pseudobarrel domain
SMARTSM010191.0E-10695IPR003340B3 DNA binding domain
SuperFamilySSF1019361.24E-171394IPR015300DNA-binding pseudobarrel domain
PfamPF023622.7E-111393IPR003340B3 DNA binding domain
CDDcd100172.17E-141593No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    Send to blast
MKRSKFFRLI GSEDCQLEVP SEFVEEHGNQ LSDVGVLKVR TGDTWNIGLR RFAGRIVFNG  60
GWKEFADHYS LDAGYCLFFT YSGNSRFDVV ICDPGDAEII YPTKPVKFKE PMLDVETVLP  120
VTKSNGTEKK FVKKLSITCN KENLRESVLS AGKHHQEKQI IELGKSLSIR FLYNLCSCS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5EQK51e-117A0A2G5EQK5_AQUCA; Uncharacterized protein
STRINGAquca_005_00157.11e-118(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.17e-20B3 family protein