PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco031799.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family bZIP
Protein Properties Length: 53aa    MW: 5971.96 Da    PI: 10.6134
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco031799.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1322.6e-108491152
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1 11 qkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52
                   NR +A rs +RK  ++ eLe+kv++L++e ++L  ++  l
  Aco031799.1  8 LANRQSAARSKERKIRYTSELERKVQTLQTEATTLSAQVTLL 49
                 56*********************************9988766 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.0E-12650No hitNo description
SuperFamilySSF579592.19E-11651No hitNo description
PROSITE profilePS502178.944652IPR004827Basic-leucine zipper domain
CDDcd147031.17E-16651No hitNo description
PfamPF001709.5E-9649IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 53 aa     Download sequence    Send to blast
MVLCCRILAN RQSAARSKER KIRYTSELER KVQTLQTEAT TLSAQVTLLQ HP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011075008.13e-21PREDICTED: LOW QUALITY PROTEIN: transcription factor VIP1-like, partial
RefseqXP_012066035.16e-21PREDICTED: transcription factor VIP1
SwissprotQ6S4P45e-20RF2B_ORYSJ; Transcription factor RF2b
TrEMBLW5EX694e-22W5EX69_WHEAT; Uncharacterized protein
STRINGGSMUA_Achr3P19170_0015e-21(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1779279
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43700.12e-20VIRE2-interacting protein 1