PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco023605.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family ERF
Protein Properties Length: 289aa    MW: 32022.5 Da    PI: 7.1505
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco023605.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.39.3e-194494155
          AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 s++ GVr+++ +grWvAeI+d +   ++ r +lg+f taeeAa+a+++a+  l+g
  Aco023605.1 44 SKFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEEAARAYDEAACLLRG 94
                 79********.7*********32...35**********************99987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.02E-3144101No hitNo description
SuperFamilySSF541712.22E-1944102IPR016177DNA-binding domain
PfamPF008472.9E-134494IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.8E-2845102IPR001471AP2/ERF domain
PROSITE profilePS5103219.55945102IPR001471AP2/ERF domain
SMARTSM003805.0E-3645108IPR001471AP2/ERF domain
PRINTSPR003671.0E-74657IPR001471AP2/ERF domain
PRINTSPR003671.0E-76884IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000302Biological Processresponse to reactive oxygen species
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009723Biological Processresponse to ethylene
GO:0035865Biological Processcellular response to potassium ion
GO:0048528Biological Processpost-embryonic root development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MELHFQQQQQ QQQQQQQQQQ QYYLGTAASN KPNNKLKGKS RSSSKFVGVR QRPSGRWVAE  60
IKDTTQKIRM WLGTFETAEE AARAYDEAAC LLRGSNTRTN FVAHPSSPNS PLASRIRSLL  120
DHKKLKKSNT SPSNSTSITN TSISTSSTAA TTCSSTAATS ETMTNGTVST GATPCGDMKH  180
DTQLSTDHEV FRPYFINGSE DARLGSAHAD QSWAFEAGFD RLAVFDGYGE LANLINPEVS  240
EFERMRVERQ ISASLYAMNG VQEYFETVLD PCDLLWDLPP LCHLFCRS*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00521DAPTransfer from AT5G19790Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008804361.11e-101PREDICTED: ethylene-responsive transcription factor RAP2-11-like
TrEMBLD7TI778e-89D7TI77_VITVI; Putative uncharacterized protein
STRINGVIT_08s0007g07250.t012e-88(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP39003273
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.16e-28related to AP2 11