PlantTFDB
Plant Transcription Factor Database
PlantRegMap/PlantTFDB v5.0
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco017311.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family B3
Protein Properties Length: 101aa    MW: 11623.4 Da    PI: 4.89
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco017311.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.52.8e-142761797
                 E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
           B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
                 v+pk+f  e  + +++++ lt  + ++++Wev+++ +++ +r  +++GWk+F+ +n+L+ gD +vF+l+++++ ++ v+v+
  Aco017311.1  2 VVPKEFR-E--LLPPSPVWLT-LSCKNKTWEVRYCGDRYLKR--FETGWKRFAIENNLEIGDGCVFELMDNENLNFGVRVL 76
                 5666664.2..2234555555.34588*******88888888..89**********************9988887777665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512575122No hitNo description
PfamPF023629.2E-12175IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.102.8E-14174IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086313.296179IPR003340B3 DNA binding domain
CDDcd100174.21E-14177No hitNo description
SuperFamilySSF1019361.92E-14177IPR015300DNA-binding pseudobarrel domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    Send to blast
MVVPKEFREL LPPSPVWLTL SCKNKTWEVR YCGDRYLKRF ETGWKRFAIE NNLEIGDGCV  60
FELMDNENLN FGVRVLKGEI PSLVRNIEDG RSSDSPIMID *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020084987.12e-68B3 domain-containing protein Os04g0386900-like
RefseqXP_020085306.13e-68B3 domain-containing protein Os04g0386900-like
RefseqXP_020085307.13e-68B3 domain-containing protein Os04g0386900-like
TrEMBLA0A199V0547e-67A0A199V054_ANACO; B3 domain-containing protein
STRINGXP_008776698.11e-37(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP89543545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-07B3 family protein