PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco017113.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family bZIP
Protein Properties Length: 425aa    MW: 46768.8 Da    PI: 6.5893
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco017113.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.42.4e-11171200534
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeek 34 
                  k  rr+++NReAAr+sR+RKka+i++Le  
  Aco017113.1 171 KILRRLAQNREAARKSRLRKKAYIQQLESS 200
                  5679***********************975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.1E-8166212No hitNo description
SMARTSM003388.9E-10167231IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.875169213IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.75E-8171213No hitNo description
PfamPF001703.4E-8171200IPR004827Basic-leucine zipper domain
PROSITE patternPS000360174189IPR004827Basic-leucine zipper domain
PfamPF141449.4E-27266340IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    Send to blast
MGDNCRGSSK EGEQQQQQQQ QQQLLQQQVL HSCCSSSSGM IGPSSSMSKD SGAYDLAELD  60
QALFFYLDGN DQSSLVQAQR QTLNIFPSEP MHVEDPSSKG AMTMIPDGGS SKKPLNKPME  120
LTGKEKSDPS IPHPDDQRKE ITKTSIKRGG NGKGTTTSSS EHEGPKTPDP KILRRLAQNR  180
EAARKSRLRK KAYIQQLESS RVRLIQLEQD LQRARSTQGT LLSGIAAVVG DQGLANSTSS  240
CTGTSSEAAM FDVEYRRWLE EHHKLMLQLR AAVESNLADG QMQMFVEAAV SHYDVLMGLK  300
GVIVRADAFH LMSGTWKTPA ERCFVWIGDF RPSELIKVVR KYLEPLSEPQ MLGIYSLQQS  360
VHESEDALNQ GLEAVHQSLS DTISSEVMSS PPDMATYTAH LSLALDKLAS LEAFVRQTTR  420
LIVV*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1069883e-31AK106988.1 Oryza sativa Japonica Group cDNA clone:002-120-A05, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010943572.11e-150PREDICTED: transcription factor HBP-1b(c38)-like
SwissprotO241602e-85TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A151TUB51e-148A0A151TUB5_CAJCA; Transcription factor HBP-1b(C1)
STRINGVIT_08s0007g06160.t011e-143(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27323669
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-111bZIP family protein