PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco015663.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family bZIP
Protein Properties Length: 427aa    MW: 47717.9 Da    PI: 8.0655
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco015663.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.44.7e-11129158534
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeek 34 
                  k  rr+++NReAAr+sR+RKka+i++Le  
  Aco015663.1 129 KTLRRLAQNREAARKSRLRKKAYIQQLESS 158
                  7789***********************975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.3E-8124171No hitNo description
SMARTSM003381.1E-6125213IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.209127171IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.75E-7129171No hitNo description
PfamPF001704.2E-8129158IPR004827Basic-leucine zipper domain
PROSITE patternPS000360132147IPR004827Basic-leucine zipper domain
PfamPF141441.6E-30222296IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 427 aa     Download sequence    Send to blast
MIHPSSSNNI HGNIMRKDSG GYDFAELDQA LFLYLDGQEQ SGSQEHRQTL NIFPSQPMHV  60
EPSNSKGPIS LIPNTSSTSK GPSNQSMEPG KPRTETGKGT KPTVKREGNN GKATVSNSDQ  120
EGPKTPDPKT LRRLAQNREA ARKSRLRKKA YIQQLESSRI RLSQIEQELQ RSRAQGVLFG  180
GGASGGLLGE QGLPTSMGGL SSDAAMFDLE YGRWLEEHHK IMCQLRAALE EHLPENQLRM  240
FVESTLSHYE VLMNLKSIVA KSDVFHLFSG MWKTPTERCF LWIGDFRPSE LIKIVLRHIE  300
PLSEQQFLGI CGLQQSMQES EEALNQGLEA LHHSLSETIN SDVLSSPSNM ANYMGHMSVA  360
INKLTALEGF VRQADNLRQQ TLHRLQQILT TQQSARCFLE IAEYFHRLRA LSSLWIARPR  420
QDGPFG*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008800656.10.0PREDICTED: transcription factor HBP-1b(c38)-like
SwissprotP239231e-121HBP1B_WHEAT; Transcription factor HBP-1b(c38)
SwissprotQ415581e-119HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A151TUB50.0A0A151TUB5_CAJCA; Transcription factor HBP-1b(C1)
STRINGVIT_08s0007g06160.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27323669
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-165bZIP family protein