PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco014894.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family bHLH
Protein Properties Length: 421aa    MW: 45634.9 Da    PI: 6.5854
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco014894.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.83e-063113491154
                  HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                   R +++ +++  L++l+ +      +K + a++L++A+eYIk L
  Aco014894.1 311 VRKEKMGDRITALQQLVSPF-----GKTDTASVLTEAIEYIKFL 349
                  5778999**********998.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.1300349IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.25E-7310353No hitNo description
Gene3DG3DSA:4.10.280.107.1E-9310363IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.36E-11310364IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.0038311355IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 421 aa     Download sequence    Send to blast
MGEDVIYSRM YSGQEGWWNS NIPRTSCFNG SAVMSASISC STEFTDVMGG GFNWAALAAD  60
VPLSQSQSQS QSSSGESPGS AVSNNSLSSF QDTYHAATAQ MTDLAAVSSP AVDWNQKPLL  120
SRESGYHGLF QEGNKSSSLR GDDLQLLNPN PNPNPNPNPN QKNNMCDENI SSSVSLSHNI  180
NQGLPQYQHH YESLLRSLLE PEILEPYYTQ PLPEPSPPKQ QPLQFSTHIN TSSAIRPATT  240
PISKDLRLSS PRNDVVVSHH ALKEINLNRS NRATKSVSEG AGGLSPDIAA QQPALKKPRI  300
ETPSPLPTFK VRKEKMGDRI TALQQLVSPF GKTDTASVLT EAIEYIKFLH DQVGVLTAPY  360
LNNGNQMLHL KSLEKLNGTQ GPKRDLGSRG LCLMPVSSTH AVASEIPFDF WAPTFGGTFN  420
*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020102655.10.0transcription factor bHLH112-like
TrEMBLA0A199VDY20.0A0A199VDY2_ANACO; Transcription factor bHLH112
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22163787
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.32e-45bHLH family protein