PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco013645.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family GeBP
Protein Properties Length: 157aa    MW: 17933.4 Da    PI: 10.7623
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco013645.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57355.21.9e-172981497
       DUF573 14 vlLqGlidfkaktgk........spsddidafyefvkksis.fkvsksqlveKirrLKkKfkkkvkk....aksgkepsfskehdqkifelskkiWg 97
                 ++L G+++f +++g+        + ++d+  f+e ++ ++  ++ ++ ql +K+rrLK+K++   ++     +     +f+++hd+ +fel++kiW 
  Aco013645.1  2 AILEGFLEFVTERGTptrapdhhHHHHDTAPFFERIRPRLRrADLNRAQLADKLRRLKRKYRAAASRlaaaPSAAAAAAFRTPHDRATFELARKIWS 98
                 69************9999888755667**********9995389**********************9766545677889*****************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045044.7E-17298IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    Send to blast
MAILEGFLEF VTERGTPTRA PDHHHHHHDT APFFERIRPR LRRADLNRAQ LADKLRRLKR  60
KYRAAASRLA AAPSAAAAAA FRTPHDRATF ELARKIWSPA TPAPEPEEGR KGMEEKWREQ  120
QILELEVLLK RAELLHEHFS AKLEEMRSTT TTTSSN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020101254.11e-108probable transcription factor At4g00390
TrEMBLA0A199UHK42e-66A0A199UHK4_ANACO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP97437123